Transcript: lnc-KCNH1-25:2

Basic information

LNCipedia transcript ID: lnc-KCNH1-25:2 
LNCipedia gene ID: lnc-KCNH1-25
Ensembl Gene ID: ENSG00000284376
Ensembl Transcript ID: ENST00000450040
Location (hg38): chr1:211172170-211188507
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 394 bp
Exons: 5
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000450040.2
Alternative gene names: ENSG00000284376.1; AC092017.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.0541 non-coding 
CPAT coding probability 1.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNH1-25:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-IRF6-25:2
5.1 lnc-IRF6-25:2
5.2 lnc-KCNH1-25:2