Transcript: lnc-KCNJ3-7:9

Basic information

LNCipedia transcript ID: lnc-KCNJ3-7:9 
LNCipedia gene ID: lnc-KCNJ3-7
Location (hg38): chr2:155525475-155586489
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 11399 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000045193.1|FTMT20700080992.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 51.4264 non-coding 
CPAT coding probability 2.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KCNJ3-7:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KCNJ3-7:9
5.0 lnc-KCNJ3-7:9
5.1 lnc-KCNJ3-7:9
5.2 lnc-KCNJ3-7:9