Transcript: lnc-KCNK6-1:1

Basic information

LNCipedia transcript ID: lnc-KCNK6-1:1 
LNCipedia gene ID: lnc-KCNK6-1
Location (hg38): chr19:38331634-38332076
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 443 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT066205; ENST00000602211.1
Alternative gene names: ENSG00000268913.1; AC026806.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.5145 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNK6-1:1 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNK6-1:1
4.0 lnc-KCNK6-1:1
4.1 lnc-KCNK6-1:1
5.0 lnc-KCNK6-1:1
5.1 lnc-MRPS12-20:1
5.2 lnc-KCNK6-1:1