Transcript: lnc-KCNMB1-2:2

Basic information

LNCipedia transcript ID: lnc-KCNMB1-2:2 
LNCipedia gene ID: lnc-KCNMB1-2
Location (hg38): chr5:170677443-170680087
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1884 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_3057_chr5:170104446-170107091_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.6639 non-coding 
CPAT coding probability 3.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNMB1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNMB1-2:2
4.0 lnc-KCNMB1-2:2
4.1 lnc-KCNMB1-2:2
5.0 lnc-KCNMB1-2:2
5.1 lnc-PDLIM7-106:3
5.2 lnc-KCNMB1-2:2