Transcript: lnc-KCNMB1-2:3

Basic information

LNCipedia transcript ID: lnc-KCNMB1-2:3 
LNCipedia gene ID: lnc-KCNMB1-2
RefSeq ID: NR_136214
Location (hg38): chr5:170639158-170681470
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1604 bp
Exons: 6
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136214.1
Alternative gene names: LOC105377716


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -146.1091 non-coding 
CPAT coding probability 12.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNMB1-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PDLIM7-106:1
5.1 lnc-PDLIM7-106:1
5.2 lnc-KCNMB1-2:3