Transcript: lnc-KCNMB1-3:4

Basic information

LNCipedia transcript ID: lnc-KCNMB1-3:4 
LNCipedia gene ID: lnc-KCNMB1-3
Location (hg38): chr5:170744865-170747577
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1822 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010552; NONHSAT105057
Alternative gene names: XLOC_005079; linc-KCNMB1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.2095 non-coding 
CPAT coding probability 89.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KCNMB1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KCNMB1-1:1
3.1 lnc-KCNMB1-3:4
4.0 lnc-KCNMB1-3:4
4.1 lnc-KCNMB1-3:4
5.0 lnc-KCNMB1-3:4
5.1 lnc-PDLIM7-105:5
5.2 lnc-KCNMB1-3:4