Transcript: lnc-KCNS2-5:4

Basic information

LNCipedia transcript ID: lnc-KCNS2-5:4 
LNCipedia gene ID: lnc-KCNS2-5
Location (hg38): chr8:98367398-98367984
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 587 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000099942.1|HBMT00001398392.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.0994 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNS2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KCNS2-5:4
5.0 lnc-KCNS2-5:4
5.1 lnc-CA2-144:1
5.2 lnc-KCNS2-5:4