Transcript: lnc-KCTD17-6:1

Basic information

LNCipedia transcript ID: lnc-KCTD17-6:1 
LNCipedia gene ID: lnc-KCTD17-6
Location (hg38): chr22:37166759-37168235
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1477 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235237.1|ENCT00000278347.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -52.9797 non-coding 
CPAT coding probability 19.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCTD17-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYTH4-1:2
5.0 lnc-CYTH4-1:2
5.1 lnc-MCM5-50:2
5.2 lnc-KCTD17-6:1