Transcript: lnc-KDM2A-4:2

Basic information

LNCipedia transcript ID: lnc-KDM2A-4:2 
LNCipedia gene ID: lnc-KDM2A-4
Location (hg38): chr11:67074415-67148263
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 850 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_1279_NR_024469
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.0481 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KDM2A-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RHOD-1:2
4.0 lnc-KDM2A-4:2
4.1 lnc-KDM2A-4:2
5.0 lnc-KDM2A-4:2
5.1 lnc-RCE1-13:2
5.2 lnc-KDM2A-4:2