Transcript: lnc-KDM3B-1:6

Basic information

LNCipedia transcript ID: lnc-KDM3B-1:6 
LNCipedia gene ID: lnc-KDM3B-1
Location (hg38): chr5:138332105-138337146
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 551 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT104024
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -203.6037 non-coding 
CPAT coding probability 13.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KDM3B-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM53C-1:3
4.0 lnc-FAM53C-1:3
4.1 lnc-FAM53C-1:3
5.0 lnc-FAM53C-1:3
5.1 lnc-EIF4EBP3-51:3
5.2 lnc-KDM3B-1:6