Transcript: lnc-KDM5A-3:2

Basic information

LNCipedia transcript ID: lnc-KDM5A-3:2 
LNCipedia gene ID: lnc-KDM5A-3
RefSeq ID: NR_134624
Location (hg38): chr12:585698-586486
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 540 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134624.1
Alternative gene names: LOC105369595


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -423.8578 non-coding 
CPAT coding probability 3.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KDM5A-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CHD4-117:2
5.1 lnc-CHD4-117:2
5.2 lnc-KDM5A-3:2