Transcript: lnc-KDM8-1:3

Basic information

LNCipedia transcript ID: lnc-KDM8-1:3 
LNCipedia gene ID: lnc-KDM8-1
Location (hg38): chr16:27066927-27069165
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2239 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234186.2|ENST00000418886.1; ENSG00000234186.2|ENST00000505035.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -74.7883 non-coding 
CPAT coding probability 16.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KDM8-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-JMJD5-1:3
5.0 lnc-JMJD5-1:3
5.1 lnc-SGF29-38:3
5.2 lnc-KDM8-1:3