Transcript: lnc-KHDRBS3-4:10

Basic information

LNCipedia transcript ID: lnc-KHDRBS3-4:10 
LNCipedia gene ID: lnc-KHDRBS3-4
Location (hg38): chr8:134838122-134842288
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 253 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT129274; FPKM1_group_32335_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -453.5457 non-coding 
CPAT coding probability 3.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHDRBS3-4:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KHDRBS3-4:10
4.0 lnc-KHDRBS3-4:10
4.1 lnc-KHDRBS3-4:10
5.0 lnc-KHDRBS3-4:10
5.1 lnc-MYC-65:17
5.2 lnc-KHDRBS3-4:10