Transcript: lnc-KHDRBS3-4:17

Basic information

LNCipedia transcript ID: lnc-KHDRBS3-4:17 
LNCipedia gene ID: lnc-KHDRBS3-4
Location (hg38): chr8:134832691-134840137
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4031 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254028.1|ENCT00000430686.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.3743 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHDRBS3-4:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KHDRBS3-4:17
5.0 lnc-KHDRBS3-4:17
5.1 lnc-MYC-65:9
5.2 lnc-KHDRBS3-4:17