Transcript: lnc-KHDRBS3-6:1

Basic information

LNCipedia transcript ID: lnc-KHDRBS3-6:1 
LNCipedia gene ID: lnc-KHDRBS3-6
Location (hg38): chr8:134720445-134723891
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3360 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014864; NONHSAT129255
Alternative gene names: XLOC_006933; linc-KHDRBS3-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.2758 non-coding 
CPAT coding probability 14.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHDRBS3-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KHDRBS3-6:1
3.1 lnc-KHDRBS3-6:1
4.0 lnc-KHDRBS3-6:1
4.1 lnc-KHDRBS3-6:1
5.0 lnc-KHDRBS3-6:1
5.1 lnc-MYC-61:1
5.2 lnc-KHDRBS3-6:1