Transcript: lnc-KHNYN-3:1

Basic information

LNCipedia transcript ID: lnc-KHNYN-3:1 
LNCipedia gene ID: lnc-KHNYN-3
Location (hg38): chr14:25095350-25102262
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 450 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022436; NONHSAT036070
Alternative gene names: XLOC_010773; linc-FOXG1-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.2193 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHNYN-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-80A15.1.1-2:1
3.1 lnc-RP11-80A15.1.1-3:1
4.0 lnc-RP11-80A15.1.1-3:1
4.1 lnc-RP11-80A15.1.1-3:1
5.0 lnc-RP11-80A15.1.1-3:1
5.1 lnc-PABPN1-44:1
5.2 lnc-KHNYN-3:1