Transcript: lnc-KIAA1147-3:2

Basic information

LNCipedia transcript ID: lnc-KIAA1147-3:2 
LNCipedia gene ID: lnc-KIAA1147-3
Ensembl Gene ID: ENSG00000261570
Ensembl Transcript ID: ENST00000566357
Location (hg38): chr7:141530916-141551193
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 378 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000566357.1; RP11-744I24.2-001; OTTHUMT00000420382.1; NONHSAT123720
Alternative gene names: ENSG00000261570.1; RP11-744I24.2; OTTHUMG00000172763.1; AC073878.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -246.5592 non-coding 
CPAT coding probability 4.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIAA1147-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1147-3:2
4.0 lnc-KIAA1147-3:2
4.1 lnc-KIAA1147-3:2
5.0 lnc-KIAA1147-3:2
5.1 lnc-CLEC5A-6:7
5.2 lnc-KIAA1147-3:2