Transcript: lnc-KIAA1147-5:2

Basic information

LNCipedia transcript ID: lnc-KIAA1147-5:2 
LNCipedia gene ID: lnc-KIAA1147-5
Location (hg38): chr7:141412579-141416390
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2924 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013266; NONHSAT123710
Alternative gene names: XLOC_006624; linc-MRPS33-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
MCNCCESH 100% antisense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.9721 non-coding 
CPAT coding probability 13.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KIAA1147-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA1147-3:2
3.1 lnc-KIAA1147-5:2
4.0 lnc-KIAA1147-5:2
4.1 lnc-KIAA1147-5:2
5.0 lnc-KIAA1147-5:2
5.1 lnc-BRAF-11:2
5.2 lnc-KIAA1147-5:2