Transcript: lnc-KIAA1328-5:2

Basic information

LNCipedia transcript ID: lnc-KIAA1328-5:2 
LNCipedia gene ID: lnc-KIAA1328-5
Ensembl Gene ID: ENSG00000267202
Ensembl Transcript ID: ENST00000586610
RefSeq ID: NR_134588
Location (hg38): chr18:37274460-37276400
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 469 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT058988; ENST00000586610.1; NR_134588.1
Alternative gene names: ENSG00000267202.1; RP11-797E24.3; ENSG00000267202.5; AC090386.1; LOC105372068


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -164.9996 non-coding 
CPAT coding probability 3.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIAA1328-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1328-5:2
4.0 lnc-KIAA1328-5:2
4.1 lnc-KIAA1328-5:2
5.0 lnc-KIAA1328-5:2
5.1 lnc-CTIF-94:2
5.2 lnc-KIAA1328-5:2