Transcript: lnc-KIDINS220-8:2

Basic information

LNCipedia transcript ID: lnc-KIDINS220-8:2 
LNCipedia gene ID: lnc-KIDINS220-8
Ensembl Gene ID: ENSG00000226506
Ensembl Transcript ID: ENST00000416607
Location (hg38): chr2:7889424-7897750
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 386 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000416607; ENST00000416607.1; AC007463.2-002; OTTHUMT00000323243.1; NONHSAT068970
Alternative gene names: ENSG00000226506; AC007463.2; ENSG00000226506.1; OTTHUMG00000151589.1; ENSG00000226506.5; AC007463.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -160.7251 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIDINS220-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIDINS220-6:2
3.1 lnc-KIDINS220-8:2
4.0 lnc-KIDINS220-8:2
4.1 lnc-KIDINS220-8:2
5.0 lnc-KIDINS220-8:2
5.1 lnc-RAD51AP2-141:4
5.2 lnc-KIDINS220-8:2