Transcript: lnc-KIF20B-5:1

Basic information

LNCipedia transcript ID: lnc-KIF20B-5:1 
LNCipedia gene ID: lnc-KIF20B-5
Location (hg38): chr10:90163913-90205788
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 253 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018281; NONHSAT015583
Alternative gene names: XLOC_008555; linc-RPP30-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.2499 non-coding 
CPAT coding probability 5.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIF20B-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIF20B-4:1
3.1 lnc-KIF20B-5:1
4.0 lnc-KIF20B-5:1
4.1 lnc-KIF20B-5:1
5.0 lnc-KIF20B-5:1
5.1 lnc-SMC3-278:1
5.2 lnc-KIF20B-5:1