Transcript: lnc-KIF25-2:2

Basic information

LNCipedia transcript ID: lnc-KIF25-2:2 
LNCipedia gene ID: lnc-KIF25-2
Location (hg38): chr6:168229744-168231214
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 419 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012627; NONHSAT116144
Alternative gene names: XLOC_005544; linc-SMOC2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.7199 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIF25-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIF25-2:2
3.1 lnc-KIF25-2:2
4.0 lnc-KIF25-2:2
4.1 lnc-KIF25-2:2
5.0 lnc-KIF25-2:2
5.1 lnc-SYTL3-101:3
5.2 lnc-KIF25-2:2