Transcript: lnc-KIF26B-2:1

Basic information

LNCipedia transcript ID: lnc-KIF26B-2:1 
LNCipedia gene ID: lnc-KIF26B-2
Ensembl Gene ID: ENSG00000226876
Ensembl Transcript ID: ENST00000443763
Location (hg38): chr1:246108626-246113866
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 581 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000443763.1; RP11-36N20.1-001; OTTHUMT00000097500.1; NONHSAT010699
Alternative gene names: ENSG00000226876.1; RP11-36N20.1; OTTHUMG00000040511.1; ENSG00000226876.2; AC092801.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.221 non-coding 
CPAT coding probability 4.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIF26B-2:1 yes no no no

Available literature

  1. Qiu (2014), Effects of oestrogen on long noncoding RNA expression in oestrogen receptor alpha-positive ovarian cancer cells., J. Steroid Biochem. Mol. Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIF26B-2:1
4.0 lnc-KIF26B-2:1
4.1 lnc-KIF26B-2:1
5.0 lnc-KIF26B-2:1
5.1 lnc-OR2G3-21:1
5.2 lnc-KIF26B-2:1