Transcript: lnc-KIFAP3-2:7

Basic information

LNCipedia transcript ID: lnc-KIFAP3-2:7 
LNCipedia gene ID: lnc-KIFAP3-2
RefSeq ID: NR_125958
Location (hg38): chr1:170461317-170532609
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 634 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125958; NR_125958.1
Alternative gene names: LOC101928650


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -148.5138 non-coding 
CPAT coding probability 2.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIFAP3-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIFAP3-2:7
4.0 lnc-KIFAP3-2:7
4.1 lnc-KIFAP3-2:7
5.0 lnc-KIFAP3-2:7
5.1 lnc-SH2D1B-91:6
5.2 lnc-KIFAP3-2:7