Transcript: lnc-KIFAP3-2:9

Basic information

LNCipedia transcript ID: lnc-KIFAP3-2:9 
LNCipedia gene ID: lnc-KIFAP3-2
Location (hg38): chr1:170532217-170538348
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6132 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231407.1|MICT00000024933.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.4248 non-coding 
CPAT coding probability 1.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIFAP3-2:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIFAP3-2:9
5.0 lnc-KIFAP3-2:9
5.1 lnc-SH2D1B-91:4
5.2 lnc-KIFAP3-2:9