Transcript: lnc-KIFC3-1:2

Basic information

LNCipedia transcript ID: lnc-KIFC3-1:2 
LNCipedia gene ID: lnc-KIFC3-1
Location (hg38): chr16:57684136-57689846
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2768 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000029385.1|MICT00000133269.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.4776 non-coding 
CPAT coding probability 2.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIFC3-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIFC3-1:2
5.0 lnc-KIFC3-1:2
5.1 lnc-CFAP20-19:2
5.2 lnc-KIFC3-1:2