Transcript: lnc-KLF15-2:2

Basic information

LNCipedia transcript ID: lnc-KLF15-2:2 
LNCipedia gene ID: lnc-KLF15-2
Location (hg38): chr3:126288837-126294036
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 517 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007251; NONHSAT091669
Alternative gene names: XLOC_003235; linc-ALDH1L1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.8782 non-coding 
CPAT coding probability 1.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF15-2:2 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLF15-1:2
3.1 lnc-KLF15-2:2
4.0 lnc-KLF15-2:2
4.1 lnc-KLF15-2:2
5.0 lnc-KLF15-2:2
5.1 lnc-UROC1-5:2
5.2 lnc-KLF15-2:2