Transcript: lnc-KLF17-1:14

Basic information

LNCipedia transcript ID: lnc-KLF17-1:14 
LNCipedia gene ID: lnc-KLF17-1
Ensembl Gene ID: ENSG00000230615
Ensembl Transcript ID: ENST00000623351
Location (hg38): chr1:44030443-44040273
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 482 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623351.1
Alternative gene names: ENSG00000230615.6; RP5-1198O20.4; AL139220.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.0525 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF17-1:14 yes no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KLF17-1:14
4.1 lnc-KLF17-1:14
5.0 lnc-KLF17-1:14
5.1 lnc-CDC20-18:4
5.2 lnc-KLF17-1:14