Transcript: lnc-KLF17-1:33

Basic information

LNCipedia transcript ID: lnc-KLF17-1:33 
LNCipedia gene ID: lnc-KLF17-1
Location (hg38): chr1:44048348-44115937
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 13335 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230615.2|MICT00000009715.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 89.6369 coding 
CPAT coding probability 80.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KLF17-1:33 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KLF17-1:33
5.0 lnc-KLF17-1:33
5.1 lnc-CDC20-18:22
5.2 lnc-KLF17-1:33