Transcript: lnc-KLF17-1:6

Basic information

LNCipedia transcript ID: lnc-KLF17-1:6 
LNCipedia gene ID: lnc-KLF17-1
Location (hg38): chr1:44036123-44076465
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1139 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT002853
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.3469 non-coding 
CPAT coding probability 2.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF17-1:6 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLF17-1:6
4.0 lnc-KLF17-1:6
4.1 lnc-KLF17-1:6
5.0 lnc-KLF17-1:6
5.1 lnc-CDC20-18:5
5.2 lnc-KLF17-1:6