Transcript: lnc-KLF4-15:2

Basic information

LNCipedia transcript ID: lnc-KLF4-15:2 
LNCipedia gene ID: lnc-KLF4-15
Location (hg38): chr9:106615119-106615982
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 458 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016455; NONHSAT133842
Alternative gene names: XLOC_007819; linc-ABCA1-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -218.9083 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF4-15:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLF4-5:2
3.1 lnc-KLF4-5:2
4.0 lnc-KLF4-5:2
4.1 lnc-KLF4-5:2
5.0 lnc-KLF4-5:2
5.1 lnc-SLC46A2-86:2
5.2 lnc-KLF4-15:2