Transcript: lnc-KLF6-5:11

Basic information

LNCipedia transcript ID: lnc-KLF6-5:11 
LNCipedia gene ID: lnc-KLF6-5
Location (hg38): chr10:3460240-3469219
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8980 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000117071.1|HBMT00000158742.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.6554 non-coding 
CPAT coding probability 6.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF6-5:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KLF6-5:11
5.0 lnc-KLF6-5:11
5.1 lnc-KLF6-5:11
5.2 lnc-KLF6-5:11