Transcript: lnc-KLF7-1:16

Basic information

LNCipedia transcript ID: lnc-KLF7-1:16 
LNCipedia gene ID: lnc-KLF7-1
Ensembl Gene ID: ENSG00000223725
Ensembl Transcript ID: ENST00000432413
Location (hg38): chr2:207239864-207254252
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 539 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT147140; ENST00000432413.2
Alternative gene names: ENSG00000223725.2; AC007879.5; ENSG00000223725.6; AC009226.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.5865 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF7-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLF7-1:16
4.0 lnc-KLF7-1:16
4.1 lnc-KLF7-1:16
5.0 lnc-KLF7-1:16
5.1 lnc-FN1-39:34
5.2 lnc-KLF7-1:16