Transcript: lnc-KLF8-4:1

Basic information

LNCipedia transcript ID: lnc-KLF8-4:1 
LNCipedia gene ID: lnc-KLF8-4
Ensembl Gene ID: ENSG00000227486
Ensembl Transcript ID: ENST00000452532
Location (hg38): chrX:55908123-56015173
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1007 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000452532.1; RP13-188A5.1-001; OTTHUMT00000056885.1; NONHSAT137260
Alternative gene names: ENSG00000227486.1; RP13-188A5.1; OTTHUMG00000021664.1; AL445472.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.6755 non-coding 
CPAT coding probability 15.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF8-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL353698.1-2:1
4.0 lnc-AL353698.1-1:3
4.1 lnc-AL353698.1-1:3
5.0 lnc-AL353698.1-1:3
5.1 lnc-MAGED2-6:1
5.2 lnc-KLF8-4:1