Transcript: lnc-KLHDC4-73:1

Basic information

LNCipedia transcript ID: lnc-KLHDC4-73:1 
LNCipedia gene ID: lnc-KLHDC4-73
Ensembl Gene ID: ENSG00000277504
Ensembl Transcript ID: ENST00000620306
Location (hg38): chr16:87683945-87684477
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 533 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620306.1
Alternative gene names: ENSG00000277504.1; RP11-278A23.4; AC010536.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.2516 non-coding 
CPAT coding probability 19.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHDC4-73:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC010536.2-3:1
4.1 lnc-AC010536.2-3:1
5.0 lnc-AC010536.2-3:1
5.1 lnc-KLHDC4-4:1
5.2 lnc-KLHDC4-73:1