Transcript: lnc-KLHL31-2:1

Basic information

LNCipedia transcript ID: lnc-KLHL31-2:1 
LNCipedia gene ID: lnc-KLHL31-2
Ensembl Gene ID: ENSG00000228614
Ensembl Transcript ID: ENST00000429053
Location (hg38): chr6:53790875-53794274
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 483 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011509; ENST00000429053.1; RP13-476E20.1-001; OTTHUMT00000040967.1; NONHSAT113200
Alternative gene names: XLOC_005748; linc-KLHL31-1; ENSG00000228614.1; RP13-476E20.1; OTTHUMG00000014884.1; AL513211.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -181.0596 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL31-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLHL31-2:1
3.1 lnc-KLHL31-2:1
4.0 lnc-KLHL31-2:1
4.1 lnc-KLHL31-2:1
5.0 lnc-KLHL31-2:1
5.1 lnc-GSTA5-15:1
5.2 lnc-KLHL31-2:1