Transcript: lnc-KLHL31-8:1

Basic information

LNCipedia transcript ID: lnc-KLHL31-8:1 
LNCipedia gene ID: lnc-KLHL31-8
Ensembl Gene ID: ENSG00000271218
Ensembl Transcript ID: ENST00000474641
Location (hg38): chr6:53918974-53920788
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 456 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT113203; ENST00000474641.2
Alternative gene names: ENSG00000271218.1; RP3-523E19.2; AL033384.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.9383 non-coding 
CPAT coding probability 1.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL31-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL31-8:1
4.0 lnc-KLHL31-8:1
4.1 lnc-KLHL31-8:1
5.0 lnc-KLHL31-8:1
5.1 lnc-GSTA5-18:1
5.2 lnc-KLHL31-8:1