Transcript: lnc-KLHL34-2:9

Basic information

LNCipedia transcript ID: lnc-KLHL34-2:9 
LNCipedia gene ID: lnc-KLHL34-2
Location (hg38): chrX:20949589-20953734
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 305 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017301; NONHSAT136457
Alternative gene names: XLOC_008128; linc-RPS6KA3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL34-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPS6KA3-2:1
3.1 lnc-RPS6KA3-2:1
4.0 lnc-RPS6KA3-2:1
4.1 lnc-KLHL34-2:9
5.0 lnc-KLHL34-2:9
5.1 lnc-PCSK1N-143:9
5.2 lnc-KLHL34-2:9