Transcript: lnc-KLK2-5:1

Basic information

LNCipedia transcript ID: lnc-KLK2-5:1 
LNCipedia gene ID: lnc-KLK2-5
Ensembl Gene ID: ENSG00000267879
Ensembl Transcript ID: ENST00000594512
Location (hg38): chr19:50968210-51012129
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 536 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067401; ENST00000594512.1
Alternative gene names: ENSG00000267879.1; CTB-147C22.9; AC011483.2; AC011483.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3507 non-coding 
CPAT coding probability 7.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLK2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLK2-5:1
4.0 lnc-KLK2-5:1
4.1 lnc-KLK2-5:1
5.0 lnc-KLK2-5:1
5.1 lnc-ACP4-10:3
5.2 lnc-KLK2-5:1