Transcript: lnc-KMT2E-12:2

Basic information

LNCipedia transcript ID: lnc-KMT2E-12:2 
LNCipedia gene ID: lnc-KMT2E-12
Ensembl Gene ID: ENSG00000242154
Ensembl Transcript ID: ENST00000476569
Location (hg38): chr7:105304277-105306642
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 546 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000476569.1; RP4-778K6.3-001; OTTHUMT00000348679.1; NONHSAT122617
Alternative gene names: ENSG00000242154.1; RP4-778K6.3; OTTHUMG00000157398.1; AC004884.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.3011 non-coding 
CPAT coding probability 14.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KMT2E-12:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MLL5-1:1
4.0 lnc-MLL5-1:1
4.1 lnc-MLL5-12:1
5.0 lnc-MLL5-12:1
5.1 lnc-KMT2E-12:1
5.2 lnc-KMT2E-12:2