Transcript: lnc-KNOP1-1:5

Basic information

LNCipedia transcript ID: lnc-KNOP1-1:5 
LNCipedia gene ID: lnc-KNOP1-1
Location (hg38): chr16:19761560-19766070
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 559 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261195.1|ENST00000565817.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -115.5356 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KNOP1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C16orf88-1:4
5.0 lnc-C16orf88-1:4
5.1 lnc-MARF1-58:5
5.2 lnc-KNOP1-1:5