Transcript: lnc-KPNA2-6:2

Basic information

LNCipedia transcript ID: lnc-KPNA2-6:2 
LNCipedia gene ID: lnc-KPNA2-6
Location (hg38): chr17:68101564-68133796
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8919 bp
Exons: 5
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA586:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 46.7297 non-coding 
CPAT coding probability 21.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KPNA2-6:2 no no no no

Available literature

  1. Wang (2014), Microarray expression profile analysis of long non-coding RNAs in human gastric cardiac adenocarcinoma., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00674:2
4.1 LINC00674:2
5.0 LINC00674:2
5.1 lnc-TANC2-100:2
5.2 lnc-KPNA2-6:2