Transcript: lnc-KPNA2-6:20

Basic information

LNCipedia transcript ID: lnc-KPNA2-6:20 
LNCipedia gene ID: lnc-KPNA2-6
Location (hg38): chr17:68114419-68125517
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 235 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT055476
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.0367 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KPNA2-6:20 no no no no

Available literature

  1. Wang (2014), Microarray expression profile analysis of long non-coding RNAs in human gastric cardiac adenocarcinoma., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KPNA2-1:18
4.0 LINC00674:20
4.1 LINC00674:20
5.0 LINC00674:20
5.1 lnc-TANC2-100:20
5.2 lnc-KPNA2-6:20