Transcript: lnc-KPNA2-6:4

Basic information

LNCipedia transcript ID: lnc-KPNA2-6:4 
LNCipedia gene ID: lnc-KPNA2-6
Location (hg38): chr17:68101568-68114543
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 630 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT055462
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 46.7297 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KPNA2-6:4 no no no no

Available literature

  1. Wang (2014), Microarray expression profile analysis of long non-coding RNAs in human gastric cardiac adenocarcinoma., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KPNA2-1:3
4.0 LINC00674:4
4.1 LINC00674:4
5.0 LINC00674:4
5.1 lnc-TANC2-100:4
5.2 lnc-KPNA2-6:4