Transcript: lnc-KRAS-1:1

Basic information

LNCipedia transcript ID: lnc-KRAS-1:1 
LNCipedia gene ID: lnc-KRAS-1
Ensembl Gene ID: ENSG00000257009
Ensembl Transcript ID: ENST00000535066
Location (hg38): chr12:25586010-25592928
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 537 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000535066.1; RP11-685B13.2-001; OTTHUMT00000402290.1; NONHSAT027358
Alternative gene names: ENSG00000257009.1; RP11-685B13.2; OTTHUMG00000169105.1; AC022367.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRAS-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRAS-1:1
4.0 lnc-KRAS-1:1
4.1 lnc-KRAS-1:1
5.0 lnc-KRAS-1:1
5.1 lnc-WBP11-81:1
5.2 lnc-KRAS-1:1