Transcript: lnc-KRR1-4:18

Basic information

LNCipedia transcript ID: lnc-KRR1-4:18 
LNCipedia gene ID: lnc-KRR1-4
Ensembl Gene ID: ENSG00000258077
Ensembl Transcript ID: ENST00000552466
Location (hg38): chr12:75689495-75692358
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 712 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000552466.2
Alternative gene names: ENSG00000258077.2; RP11-114H23.1; AC078923.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.3672 non-coding 
CPAT coding probability 16.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRR1-4:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRR1-2:5
4.0 lnc-PHLDA1-4:3
4.1 lnc-KRR1-4:18
5.0 lnc-KRR1-4:18
5.1 lnc-LRRC10-48:14
5.2 lnc-KRR1-4:18