Transcript: lnc-KRT80-1:6

Basic information

LNCipedia transcript ID: lnc-KRT80-1:6 
LNCipedia gene ID: lnc-KRT80-1
Location (hg38): chr12:52202266-52213621
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4211 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257137.1|ENCT00000101975.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -98.6552 non-coding 
CPAT coding probability 40.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRT80-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KRT80-1:6
5.0 lnc-KRT80-1:6
5.1 lnc-FIGNL2-1:1
5.2 lnc-KRT80-1:6