Transcript: lnc-KRTAP13-1-1:3

Basic information

LNCipedia transcript ID: lnc-KRTAP13-1-1:3 
LNCipedia gene ID: lnc-KRTAP13-1-1
Location (hg38): chr21:30083790-30097870
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 588 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT081653; FPKM1_group_20060_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -217.228 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRTAP13-1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRTAP13-1-1:3
4.0 lnc-KRTAP13-1-1:3
4.1 lnc-KRTAP13-1-1:3
5.0 lnc-KRTAP13-1-1:3
5.1 lnc-OLIG1-33:1
5.2 lnc-KRTAP13-1-1:3