Transcript: lnc-KRTCAP2-1:5

Basic information

LNCipedia transcript ID: lnc-KRTCAP2-1:5 
LNCipedia gene ID: lnc-KRTCAP2-1
Location (hg38): chr1:155169409-155173251
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 578 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT006694
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 393.3055 coding 
CPAT coding probability 68.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRTCAP2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRTCAP2-1:5
4.0 lnc-KRTCAP2-1:5
4.1 lnc-KRTCAP2-1:5
5.0 lnc-KRTCAP2-1:5
5.1 lnc-MUC1-4:5
5.2 lnc-KRTCAP2-1:5