Transcript: lnc-KRTDAP-1:5

Basic information

LNCipedia transcript ID: lnc-KRTDAP-1:5 
LNCipedia gene ID: lnc-KRTDAP-1
Location (hg38): chr19:35423211-35436530
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2781 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232680.2|MICT00000173663.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.0756 non-coding 
CPAT coding probability 46.09% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRTDAP-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KRTDAP-1:5
5.0 lnc-KRTDAP-1:5
5.1 lnc-SCGB2B2-41:1
5.2 lnc-KRTDAP-1:5